Journal: Molecular Cancer
Article Title: Genome-wide in vivo CRISPR screen identifies TGFβ3 as actionable biomarker of palbociclib resistance in triple negative breast cancer
doi: 10.1186/s12943-024-02029-4
Figure Lengend Snippet: TGFβ3 potentiates palbociclib anti-tumor effect in vivo. a mRNA expression levels of TGFB1, TGFB2 and TGFB3 in SUM159PT following TGFB3 -specific overexpression using CRISPR activation (CRISPR/dCas9 SAM) ( n = 3). Data are represented as mean ± standard deviation (SD). Significance was calculated using two-sided, unpaired t-test, p -value * < 0.05. b Mice from control (lentiSAMv2) or TGFB3 -overexpressing (TGFB3g2 SAM) groups ( n = 13) were each randomized into treatment groups (vehicle, n = 6; palbociclib, n = 7). I.p. injections of the vehicle treatment or a low dose of palbociclib (10 mg/kg) were administered until study endpoint. Data are represented as mean ± SD. c Reduction in tumor growth presented for each group treated with palbociclib, lentiSAMv2 or TGFB3g2 SAM, as compared to the same groups treated with the vehicle. Data are represented as mean, at each timepoint. d left Tumor volumes of individual mice in each group at study endpoint. right Tumor weights of individual mice in each group at study endpoint. Midlines at median. Significance was calculated using ordinary, one-way ANOVA with Tukey’s multiple comparisons test, p -value * < 0.05, ** < 0.01, *** < 0.001. e Average mRNA expression levels of TGFB3 in tumors derived from the vehicle-treated control mice ( n = 6) and the TGFB3 -overexpressing mice ( n = 6). Data are represented as mean ± SD. Significance was calculated using two-sided, unpaired t-test, p -value * < 0.05, ** < 0.01, *** < 0.001. f Protein levels of TGFB3 (60 kDa) in tumors derived from the vehicle-treated control mice ( n = 6) and the TGFB3 -overexpressing mice ( n = 6). g Spontaneous metastasis to the lungs was assessed. Lung nodules were counted and compared in lungs derived from the vehicle-treated control mice ( n = 7) and the TGFB3 -overexpressing mice ( n = 6). Data represent metastatic nodule count per pair of lungs per mouse. Midlines at median. Significance was calculated using nonparametric Mann–Whitney U-test, p -value * < 0.05, ** < 0.01, *** < 0.001. h The effect of TGFB3 CRISPR-mediated knockout on lung colonization was assessed. Data represent metastatic nodule count per pair of lungs per mouse. Midlines at median. i Schematic representation of the use of recTGFβ3 in combination with palbociclib. MDA-MB-231 TNBC cells were transplanted into the mammary fat pads of NSG mice. Tumors were palpable before mice were randomized into treatment groups: vehicle, n = 9; recTGFβ3, n = 8; palbociclib, n = 8, combo (recTGFβ3 + palbociclib), n = 9. j Average tumor volume was measured over time. Data are represented as mean ± SD. k Tumor volumes of individual mice in each group at study endpoint. Midlines at median. Significance was calculated using ordinary, one-way ANOVA with Tukey’s multiple comparisons test, p -value * < 0.05. l Quantification of Ki67-positive cells stained by immunohistochemistry in tumor tissues from all four groups. Data are represented as mean ± SD ( n = 3–4). Significance was calculated using two-sided, unpaired t-test, p -value * < 0.05. m Representative images of Ki67 staining in two tumors per group
Article Snippet: Recombinant human TGFβ3 ligand (PeproTech, Inc, cat. no. 100-36E) was dissolved in 10 mM citric acid buffer with 0.1% BSA.
Techniques: In Vivo, Expressing, Over Expression, CRISPR, Activation Assay, Standard Deviation, Control, Derivative Assay, MANN-WHITNEY, Knock-Out, Staining, Immunohistochemistry